• Alkaline pH increases swimming speed and facilitates mucus penetration for Vibrio cholerae. (2021)
    Nhu NTQ, Lee JS, Wang HJ, Dufour YS.
    Journal of Bacteriology 19: JB.00607-20
  • Vibrio cholerae adapts to sessile and motile lifestyles by cyclic di-GMP regulation of cell shape. (2020)
    Fernandez NL, Hsueh BY, Nhu NTQ, Franklin JL, Dufour YS, Waters CM.
    PNAS 117: 29046-29054
  • Tumble suppression is a conserved feature of swarming motility. (2020)
    Partridge JD, Nhu NTQ, Dufour YS, Harshey RM.
    mBio 11:e01189-20
  • Escherichia coli remodels the chemotaxis pathway for swarming. (2019)
    Partridge JD, Nhu NTQ, Dufour YS, Harshey RM.
    mBio 10:e00316-19
  • Hook length of the bacterial flagellum is optimized for maximal stability of the flagellar bundle. (2018)
    Spöring I, Martinez VA, Hotz C, Schwarz-Linek J, Grady KL, Nava-Sedeño JM, Vissers T, Singer HM, Rohde M, Bourquin C, Hatzikirou H, Poon WCK, Dufour YS, Erhardt M.
    PLoS Biology 16(9): e2006989
  • Non‐genetic diversity modulates population performance. (2016)
    Waite AJ, Frankel NW, Dufour YS, Johnston JF, Long J, Emonet T.
    Molecular Systems Biology 12(12): 895
  • Direct correlation between motile behavior and protein abundance in single cells. (2016)
    Dufour YS, Gillet S, Frankel NW, Weibel DB, Emonet T.
    PLoS Computational Biology 12(9): e1005041
  • Adaptability of non-genetic diversity in bacterial chemotaxis. (2014)
    Frankel NW, Pontius W, Dufour YS, Long J, Hernandez-Nunez L, Emonet T.
    eLife 3, e03526
  • Limits of feedback control in bacterial chemotaxis. (2014)
    Dufour YS, Fu X, Hernandez-Nunez L, Emonet T.
    PLoS Computational Biology 10(6): e1003694
  • Convergence of the transcriptional responses to heat shock and singlet oxygen stresses. (2012)
    Dufour YS, Imam S, Koo B, Green HA, Donohue TJ.
    PLoS Genetics 8(9): e1002929
  • Signal correlations in ecological niches can shape the organization and evolution of bacterial gene regulatory networks. (2012)
    Dufour YS, Donohue TJ.
    Advances in Microbial Physiology 61: 1–36
  • Conservation of thiol-oxidative stress responses regulated by SigR orthologues in actinomycetes. (2012)
    Kim MS, Dufour YS, Yoo JS, Cho YB, Park JH, Nam GB, Kim HM, Lee KM, Donohue TJ, Roe JH.
    Molecular Microbiology: 326-344
  • Extracytoplasmic function σ factors of the widely distributed group ECF41 contain a fused regulatory domain. (2012)
    Wecke T, Halang P, Staroń A, Dufour YS, Donohue TJ, Mascher T.
    MicrobiologyOpen, 1: 194–213
  • Thermal robustness: lessons from bacterial chemotaxis. (2011)
    Dufour YS, Sneddon MW, Emonet T.
    Current Biology 21: R465–8.
  • Reconstruction of the core and extended regulons of global transcription factors. (2010)
    Dufour YS, Kiley PJ, Donohue TJ.
    PLoS Genetics 6(7): e1001027.
  • chipD: a web tool to design oligonucleotide probes for high-density tiling arrays. (2010)
    Dufour YS, Wesenberg GE, Tritt AJ, Glasner JD, Perna NT, Mitchell JC, Donohue TJ.
    Nucleic Acids Research 38 Suppl: W321–5
  • H-NOX-mediated nitric oxide sensing modulates symbiotic colonization by Vibrio fischeri. (2010)
    Wang Y, Dufour YS, Carlson HK, Donohue TJ, Marletta MA, Ruby EG.
    PNAS 107: 8375–8380
  • Organization and evolution of the biological response to singlet oxygen stress. (2008)
    Dufour YS, Landick R, Donohue TJ.
    Journal of Molecular Biology 383: 713–730
  • A microfluidic chemostat for experiments with bacterial and yeast cells. (2005)
    Groisman A, Lobo C, Cho H, Campbell JK, Dufour YS, Stevens AS, Levchenko A.
    Nature Methods 2: 685–689


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